Protein
Retrieves and analyzes 3D protein structural data from RCSB PDB, PDBe, and UniProt with multi-provider orchestration and comprehensive analysis tools.
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The Protein server offers programmatic access to a vast array of 3D protein structural data. Leveraging the Model Context Protocol, it orchestrates requests across major databases like RCSB PDB, PDBe, and UniProt. This powerful tool provides functionalities for searching, retrieving, comparing, and analyzing protein structures, as well as tracking ligand interactions and performing statistical analyses on protein collections. Built for performance and scalability, it features full observability, robust error handling, and native support for serverless deployment on platforms like Cloudflare Workers.
Características Principales
- Multi-provider orchestration (RCSB PDB, PDBe, UniProt)
- Comprehensive protein structural analysis tools (comparison, similarity, ligand tracking)
- Declarative tool definitions with robust error handling
- Pluggable authentication and abstracted storage backends
- Full-stack observability with OpenTelemetry and structured logging
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Casos de Uso
- Identify protein structures that bind to specific small molecules for drug discovery and pharmacology
- Search and discover protein structures by various criteria (e.g., organism, method, resolution)
- Compare and contrast multiple protein structures to analyze conformational changes and relationships
