SCMCP

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SCMCP provides an MCP server for simplifying single-cell RNA sequencing (scRNA-Seq) analysis. It allows users to perform tasks like data I/O, preprocessing (filtering, normalization, PCA), tool applications (clustering, differential expression), plotting (violin plots, heatmaps), and cell-cell communication analysis using natural language commands. Designed for anyone analyzing scRNA-Seq data or agent developers integrating Scanpy functions, SCMCP can be used in various AI clients, plugins, and agent frameworks.

Características Principales

• Offers preprocessing modules for filtering, normalization, scaling, and more.
• Supports cell-cell communication analysis.
• Includes tools for clustering and differential expression analysis.
• Provides plotting modules for visualizations like violin plots and heatmaps.
• Reads and writes scRNA-Seq data using natural language.
• 7 GitHub stars

Casos de Uso

• Integrating Scanpy functions into AI agents.
• Performing scRNA-Seq analysis using natural language.
• Automating scRNA-Seq workflows in AI clients and plugins.