Can I manage physical lab inventory with this skill?

Yes, it covers the creation, updating, and transfer of containers, boxes, and locations, as well as batch operations for bulk inventory management.

Is it possible to query the Benchling Data Warehouse?

Yes, the skill provides guidance on accessing the Benchling Data Warehouse via SQL for historical data analysis and integration with BI tools.

Does this skill support the Benchling Python SDK?

Yes, it provides detailed patterns and implementation guides for the benchling-sdk, including authentication, entity management, and pagination strategies.

How does it handle Benchling authentication?

It supports multiple methods including API Key authentication for standalone scripts and OAuth Client Credentials for building multi-user Benchling Apps.

Can I use this to automate DNA sequence registration?

Absolutely, the skill includes specific code patterns for creating, updating, and registering DNA, RNA, and AA sequences programmatically in the Registry.

Benchling R&D Integration

Name: Benchling R&D Integration
Author: Activer007

byActiver007

Ciencia de Datos y ML

Integrates Benchling’s life sciences platform with Claude to automate laboratory workflows, manage biological registry entities, and sync inventory data via API.

Acerca de

This skill enables Claude to interact seamlessly with the Benchling R&D platform, providing a specialized interface for managing biological data, laboratory inventory, and electronic lab notebooks (ELN). It streamlines life sciences research by automating sequence registration for DNA, RNA, and proteins, tracking physical samples across storage locations, and managing complex laboratory workflows through the Benchling Python SDK and REST API. Whether you are building custom Benchling Apps, setting up event-driven integrations with AWS EventBridge, or querying the Data Warehouse for analytics, this skill provides the implementation patterns and best practices required for robust biotech automation.

Características Principales

Comprehensive Registry management for DNA, RNA, and protein sequences
Automated inventory operations for samples, containers, and storage locations
Workflow task automation and status tracking for laboratory processes
Integration support for Benchling Data Warehouse SQL queries and AWS EventBridge
0 GitHub stars
Programmatic access to Electronic Lab Notebook (ELN) entries and templates

Casos de Uso

Automating bulk sequence imports from FASTA files into the Benchling Registry
Syncing laboratory inventory data between Benchling and external management systems
Building event-driven laboratory automations that trigger on workflow status changes

Acerca de

Características Principales

Comprehensive Registry management for DNA, RNA, and protein sequences
Automated inventory operations for samples, containers, and storage locations
Workflow task automation and status tracking for laboratory processes
Integration support for Benchling Data Warehouse SQL queries and AWS EventBridge
0 GitHub stars
Programmatic access to Electronic Lab Notebook (ELN) entries and templates

Casos de Uso

Automating bulk sequence imports from FASTA files into the Benchling Registry
Syncing laboratory inventory data between Benchling and external management systems
Building event-driven laboratory automations that trigger on workflow status changes