Can I search for preprints within a specific time frame?

Yes, you can specify exact start and end dates or use the 'days-back' shortcut to find papers published within a specific recent window.

Can I integrate the search results into a data analysis pipeline?

Absolutely. The skill returns results in structured JSON format, which can be easily converted into CSV or Pandas DataFrames for downstream analysis.

Does this skill allow for bulk PDF downloading?

Yes, the tool includes scripts and Python API methods to download full-text PDFs based on DOIs retrieved from your search results.

What subject categories are supported for filtering?

The skill supports over 25 bioRxiv categories, including bioinformatics, genomics, neuroscience, synthetic biology, and animal behavior.

BioRxiv Database Search

Name: BioRxiv Database Search
Author: Activer007

byActiver007

0•

Ciencia de Datos y ML

Searches and retrieves life sciences preprints from bioRxiv using advanced filters and automated PDF downloading.

This skill provides specialized tools for interacting with the bioRxiv preprint server, allowing researchers and developers to conduct comprehensive literature reviews in the life sciences directly within Claude Code. It supports high-precision queries by keywords, authors, and specific subject categories, delivering structured metadata including abstracts, DOIs, and citation information. Whether you are tracking recent trends in genomics or automating the collection of research PDFs for machine learning analysis, this tool streamlines the process of accessing early-stage scientific publications.

Características Principales

01Automated PDF downloading for full-text research analysis

02Metadata retrieval via DOI or author name tracking

03Structured JSON output for seamless integration with data pipelines

04Advanced keyword search across titles and abstracts

050 GitHub stars

06Filtering by 25+ bioRxiv subject categories like genomics and neuroscience

Casos de Uso

01Tracking the latest preprints from specific research labs or authors

02Conducting systematic literature reviews for biological research projects

03Building automated datasets for bioinformatics and AI model training

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add activer007/ordinary-claude-skills biorxiv-database

For use in Claude.ai and ChatGPT

Download Skill