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Coding Workflow serves as the operational engine for Stage 2 qualitative research, facilitating a rigorous and transparent analysis of documents. It manages two distinct analytical streams—theoretical pattern extraction from literature and empirical coding of data using the Dialogical Coder—while ensuring the researcher remains actively engaged through mandatory interpretive pauses. By automating progress tracking and generating detailed audit documentation, it transforms AI-assisted coding from a black-box process into a verifiable, scholarly methodology suitable for high-stakes academic or professional research.