Which Benchling authentication methods are supported?

This skill provides implementation patterns for both API Key authentication, which is recommended for backend scripts, and OAuth 2.0 Client Credentials for building Benchling Apps.

Does it support biological sequence registration?

Absolutely. It provides structured examples for creating DNA, RNA, and AA sequences, including naming strategies and registry integration.

How does the skill handle high-volume data requests?

It follows Benchling best practices by utilizing Python generators for memory-efficient pagination and implementing built-in retry strategies for API rate limits.

Can I use this skill to manage physical lab samples?

Yes, the skill includes detailed guidance on managing the Benchling Inventory system, including creating containers, managing boxes, and performing item transfers.

Can I automate workflows and task assignments?

Yes, the skill covers workflow task creation, status updates, and monitoring asynchronous operations for laboratory process automation.

Benchling Integration

Name: Benchling Integration
Author: Microck

byMicrock

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データサイエンスとML

Automates life sciences R&D workflows by integrating Benchling's registry, inventory, and electronic lab notebook via API and Python SDK.

概要

This skill empowers Claude to interact directly with the Benchling R&D platform, streamlining laboratory data management and automation for scientists and developers. It provides specialized guidance on managing biological entities such as DNA and protein sequences, tracking physical inventory across containers and locations, and programmatically managing electronic lab notebook (ELN) entries. By implementing best practices for the Benchling Python SDK and REST API, this skill facilitates the creation of robust workflow automations, data warehouse querying, and event-driven integrations with external systems like AWS EventBridge.

主な機能

Event-driven integration support via AWS EventBridge
Electronic Lab Notebook (ELN) entry and template management
Comprehensive Python SDK and REST API implementation patterns
Inventory automation for containers, plates, boxes, and locations
Biological entity management for DNA, RNA, and protein sequences
81 GitHub stars

ユースケース

Automating lab inventory audits and physical sample transfers
Bulk importing biological sequences from FASTA files into the Benchling registry
Developing Benchling Apps to synchronize experimental data with external BI tools

概要

主な機能

Event-driven integration support via AWS EventBridge
Electronic Lab Notebook (ELN) entry and template management
Comprehensive Python SDK and REST API implementation patterns
Inventory automation for containers, plates, boxes, and locations
Biological entity management for DNA, RNA, and protein sequences
81 GitHub stars

ユースケース

Automating lab inventory audits and physical sample transfers
Bulk importing biological sequences from FASTA files into the Benchling registry
Developing Benchling Apps to synchronize experimental data with external BI tools