Can I manage physical inventory with this skill?

Yes, you can create containers, boxes, and locations, and automate transfers or batch operations within the Benchling inventory system.

Does it support DNA and protein sequence management?

Absolutely. The skill provides capabilities for creating, updating, and registering DNA, RNA, and AA sequences within the Benchling Registry.

What authentication methods are supported?

This skill supports both API Key authentication for scripts and OAuth 2.0 Client Credentials for building secure Benchling Apps.

Can I integrate it with external databases?

Yes, by using AWS EventBridge triggers or querying the Benchling Data Warehouse, you can synchronize data between Benchling and external analytics platforms.

How does it handle large datasets?

It utilizes memory-efficient pagination and generators within the Benchling Python SDK to process large volumes of registry entities or inventory items.

Benchling Lab Integration

Name: Benchling Lab Integration
Author: Microck

byMicrock

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データサイエンスとML

Automates life sciences research data management by integrating Claude with the Benchling R&D platform's registry, inventory, and notebooks.

概要

Benchling Lab Integration empowers researchers and developers to programmatically manage laboratory data within the Benchling cloud platform. This skill enables Claude to interact with biological entity registries, automate inventory transfers, manage electronic lab notebook (ELN) entries, and orchestrate laboratory workflows using the Benchling Python SDK and REST API. It is ideal for building automated data pipelines, syncing external systems with lab results, and performing complex queries on the Benchling Data Warehouse to streamline life sciences R&D operations.

主な機能

Real-time event integration via AWS EventBridge and Data Warehouse querying
Workflow automation and task status tracking
Electronic Lab Notebook (ELN) entry creation and template management
Registry management for DNA, RNA, and protein sequences
Automated inventory operations for containers, boxes, and locations
81 GitHub stars

ユースケース

Building event-driven triggers to update external systems when workflow tasks are completed
Syncing physical inventory records with digital sample tracking across laboratory locations
Automating bulk imports of DNA sequences from FASTA files into the Benchling registry

概要

主な機能

Real-time event integration via AWS EventBridge and Data Warehouse querying
Workflow automation and task status tracking
Electronic Lab Notebook (ELN) entry creation and template management
Registry management for DNA, RNA, and protein sequences
Automated inventory operations for containers, boxes, and locations
81 GitHub stars

ユースケース

Building event-driven triggers to update external systems when workflow tasks are completed
Syncing physical inventory records with digital sample tracking across laboratory locations
Automating bulk imports of DNA sequences from FASTA files into the Benchling registry