SAM Cell Segmentation FAQs

Question 1

Does this skill support both SAM and MobileSAM?

Accepted Answer

Yes. The skill includes specific implementation patterns for both the standard SAM model and the lightweight MobileSAM, including proper device handling for CUDA and CPU environments.

Question 2

When should I use this skill?

Accepted Answer

You should use this skill when developing deep learning inference scripts, building CLI tools for image processing, or needing to convert binary segmentation masks into CSV-compatible coordinate lists for biological research.

Question 3

What does the SAM Cell Segmentation skill do?

Accepted Answer

This skill equips Claude Code with specialized patterns for implementing biological image segmentation pipelines. It focuses on using Segment Anything Model (SAM) and MobileSAM to generate masks and convert them into precise polygon coordinates for microscopy data analysis.

Question 4

How does it handle mask-to-polygon conversion?

Accepted Answer

The skill provides optimized OpenCV-based logic to convert binary masks into simplified polygon representations. It ensures that coordinates are correctly formatted as lists to prevent common serialization errors in data science pipelines.

Question 5

How does this skill improve my ML development workflow?

Accepted Answer

It streamlines the creation of ML pipelines by providing standardized CLI design patterns, enforcing data type consistency (such as list-based coordinate handling), and offering automated verification checklists to ensure script outputs pass evaluation metrics like IoU.

SAM Cell Segmentation

SAM Cell Segmentation

概要

主な機能

ユースケース

概要

主な機能

ユースケース