Does it support biological sequence manipulation?

Absolutely. It provides patterns for creating and updating DNA, RNA, and Amino Acid sequences, including registry operations and custom schema field updates.

What credentials are required to use the Benchling skill?

You need an active Benchling account and either an API key (for scripts) or OAuth client credentials (for apps) obtained from your Benchling tenant settings.

Does this skill help with Benchling Data Warehouse queries?

Yes, it includes guidance on accessing the Data Warehouse to run SQL queries for historical analytics, reporting, and BI tool integration.

Can I automate electronic lab notebook entries?

Yes, you can programmatically create new ELN entries, apply entry schemas, and link registry entities or results to specific notebook entries.

Can I manage physical lab inventory with this skill?

Yes, the skill supports creating and updating containers, plates, boxes, and locations, as well as performing transfers and batch operations.

Benchling Integration

Name: Benchling Integration
Author: oimiragieo

byoimiragieo

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데이터 과학 및 ML

Automates Benchling R&D platform operations including sequence registry management, laboratory inventory tracking, and electronic lab notebook (ELN) documentation.

This skill empowers Claude to interact directly with the Benchling cloud platform, enabling seamless management of life sciences R&D data. It provides specialized capabilities for manipulating biological sequences (DNA, RNA, proteins), automating physical inventory operations across containers and locations, and programmatically creating or updating electronic lab notebook entries. Whether you are building complex Benchling Apps, syncing data with external systems, or querying the Benchling Data Warehouse for analytics, this skill streamlines the integration process using Benchling's Python SDK and REST API patterns.

주요 기능

01Workflow task management and status tracking for laboratory process automation

02Direct integration guidance for Benchling Data Warehouse and AWS EventBridge events

03Electronic Lab Notebook (ELN) automation for creating, updating, and linking experiment entries

04Programmatic management of DNA, RNA, and protein sequences within the Benchling Registry

05Automated laboratory inventory tracking for samples, containers, and storage locations

0617 GitHub stars

사용 사례

01Synchronizing laboratory inventory data between Benchling and external sample management or LIMS systems

02Automating bulk sequence imports from FASTA files into the Benchling Registry with custom metadata

03Building event-driven triggers to update external databases or Slack notifications when experiment results are recorded

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add oimiragieo/agent-studio benchling-integration

For use in Claude.ai and ChatGPT

Download Skill