ETE (Environment for Tree Exploration) is a comprehensive toolkit designed for the automated manipulation, analysis, and visualization of phylogenetic trees. It enables researchers to handle complex tree formats like Newick and NHX, detect evolutionary events such as orthology and paralogy, and integrate directly with the NCBI Taxonomy database for automated annotation. This skill is essential for phylogenomic research, providing the programmatic tools to perform topology modifications, compute tree distances, and generate publication-ready graphics in PDF, SVG, or PNG formats.
주요 기능
01Publication-Quality Visualization (PDF/SVG/PNG)
02Hierarchical Clustering and Heatmap Analysis
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04Evolutionary Event Detection (Orthology/Paralogy)
05Comprehensive Tree I/O and Topology Manipulation
06Deep NCBI Taxonomy Database Integration
