AlphaGenome
bytaehojo
0Provides natural language access to Google DeepMind's AlphaGenome for advanced regulatory genomics analysis and variant effect prediction.
About
The AlphaGenome tool offers a powerful interface to Google DeepMind's AlphaGenome, enabling users to perform sophisticated genomic variant analysis and regulatory genomics studies using natural language queries. It facilitates the prediction of regulatory impacts across multiple molecular modalities, identifies regulatory elements like promoters and enhancers, and allows for batch scoring and prioritization of genetic variants. This server acts as a bridge, making cutting-edge genomic AI accessible without the need for complex coding, streamlining research in areas from GWAS to drug target discovery.
Key Features
- Predict variant regulatory impacts across 11 molecular modalities
- Identify regulatory elements in genomic regions
- Score and prioritize multiple variants by regulatory impact
- Query variants using natural language (rsIDs, genomic coordinates)
- Perform multi-modal analysis for gene expression, chromatin, and TF binding
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Use Cases
- Prioritize GWAS hits by functional impact in post-GWAS analysis
- Assess pathogenicity of variants of uncertain significance (VUS) for clinical interpretation
- Identify regulatory variants affecting target genes for drug discovery
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