Bio Agents
Enables natural language interaction with biological databases such as Protein Data Bank and ChEMBL.
About
Bio Agents is a collection of microservices and clients designed for natural language interaction with biological databases. It comprises components like an LLM Client offering web UI and terminal interfaces, a PDB Server for Protein Data Bank API services, and a ChEMBL Server for chemical database API services. Built using the FastMCP framework, Bio Agents facilitates querying and retrieving data from biological sources through a user-friendly interface, supporting both asynchronous operations and Docker Compose deployment for simplified setup and management.
Key Features
- Natural language interface to biological databases
- LLM Client with web UI and terminal modes
- PDB Server for Protein Data Bank API
- ChEMBL Server for chemical database API
- Docker Compose support for easy deployment
- 0 GitHub stars
Use Cases
- Interacting with chemical databases via natural language prompts
- Building bio agent applications
- Querying Protein Data Bank using natural language
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