Ensembl
Provides large language models with access to the Ensembl genomics database for querying genomic data, gene information, sequences, and variants.
About
Ensembl enables AI assistants to query the Ensembl genomics database, providing access to a wealth of genomic information. This includes detailed gene information (by ID or symbol), gene search capabilities across species, sequence retrieval for genomic regions, variant data with annotations, and transcript details. It supports multiple species, cross-references to external databases, and includes built-in rate limiting to ensure responsible API usage.
Key Features
- Retrieves DNA sequences for genomic regions
- Searches genes across multiple species
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- Queries genetic variants and their annotations
- Accesses transcript details and isoforms
- Retrieves detailed gene information
Use Cases
- Retrieving DNA sequences for specified genomic intervals
- Answering LLM queries about gene location and function
- Identifying variants within specific gene regions
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