Fgbio
Wraps fgbio bioinformatics tools, enabling their deployment as modular MCP servers.
About
Fgbio provides a specialized wrapper repository for integrating the powerful fgbio bioinformatics toolkit into an MCP server architecture. This initiative aims to transform fgbio's standalone command-line tools into scalable, modular services, simplifying their deployment and management within a distributed computing environment. The initial implementation focuses on `fgbio-bam`, demonstrating a clear architectural blueprint for extending fgbio's robust genomic data processing capabilities into a service-oriented framework.
Key Features
- Integrates fgbio bioinformatics tools into an MCP server architecture
- Provides specialized wrappers for fgbio utilities
- Features a modular design for scalable deployment
- Includes a reference architecture for fgbio-bam integration
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Use Cases
- Deploying fgbio tools as scalable services
- Building distributed bioinformatics processing pipelines
- Standardizing access to genomic data analysis functionalities
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