GTEx Portal
Provides structured access to the GTEx Portal API, enabling AI assistants to query and analyze genomics data through 25 specialized tools.
About
The GTEx Portal server offers comprehensive access to the GTEx Portal API, featuring 25 specialized tools categorized for expression analysis, association analysis, and reference data. It empowers AI assistants to query and analyze gene expression and regulatory data from 54 non-diseased tissue sites across nearly 1000 individuals, supporting diverse genomics research applications like eQTL mapping, tissue expression profiling, and variant analysis. The server is built with robust error handling, caching, and validation to ensure reliable and efficient data retrieval from the GTEx v8 dataset.
Key Features
- Access to 25 specialized genomics tools for expression, association, and reference analysis.
- Comprehensive gene expression analysis, including median expression, tissue specificity, and differential expression.
- eQTL/sQTL analysis capabilities to explore genetic associations across tissues.
- Robust API integration with the GTEx Portal, including rate limiting, caching, and pagination.
- Designed for seamless integration with Model Context Protocol (MCP) compatible AI assistants.
- 1 GitHub stars
Use Cases
- Enable AI assistants to query and analyze gene expression and regulatory data from GTEx.
- Conduct advanced genomics research, including eQTL mapping and tissue-specific gene identification.
- Validate gene/variant identifiers and convert genomic coordinates for research projects.