Does it support lab notebook automation?

Absolutely. You can use this skill to programmatically create ELN entries, manage templates, and link specific entities or results to notebook records.

Can I perform bulk inventory operations?

Yes, the skill includes best practices for pagination and asynchronous tasks to handle large-scale inventory transfers and container management efficiently.

How does this skill handle Benchling authentication?

It provides standardized methods for both API Key authentication (recommended for scripts) and OAuth Client Credentials (recommended for Benchling Apps).

Can I use this skill to manage biological sequences?

Yes, the skill includes specific implementations for creating, updating, and registering DNA, RNA, and AA sequences directly into the Benchling Registry.

What is the Benchling Integration skill for Claude Code?

It is a specialized skill that provides implementation patterns and domain-specific guidance for interacting with the Benchling R&D platform using its Python SDK and REST API.

Benchling R&D Integration

Name: Benchling R&D Integration
Author: Activer007

byActiver007

Data Science & ML

Automates laboratory data management by integrating Claude with the Benchling R&D platform for registry, inventory, and notebook operations.

About

This skill provides a comprehensive bridge between Claude and the Benchling Life Sciences R&D platform, enabling seamless management of biological entities, lab inventory, and electronic notebook entries. It allows researchers and developers to automate complex laboratory workflows using the Benchling Python SDK and REST API, facilitating tasks such as bulk sequence registration, sample tracking, and workflow status updates. Whether you're syncing data with external systems or querying the Benchling Data Warehouse for analytics, this skill provides the standardized patterns and implementation guidance needed for efficient lab data automation.

Key Features

Programmatic access to Benchling Registry for DNA, RNA, and protein sequences
Automated inventory management including containers, boxes, and locations
Integration with Benchling Data Warehouse for advanced SQL-based analytics
0 GitHub stars
Workflow task orchestration and real-time status tracking via AWS EventBridge
Electronic Lab Notebook (ELN) entry creation and documentation automation

Use Cases

Bulk importing and registering DNA sequences from FASTA files into the Benchling registry
Automating physical sample transfers and inventory audits within complex laboratory setups
Building event-driven integrations to synchronize Benchling data with external databases or BI tools

About

Key Features

Programmatic access to Benchling Registry for DNA, RNA, and protein sequences
Automated inventory management including containers, boxes, and locations
Integration with Benchling Data Warehouse for advanced SQL-based analytics
0 GitHub stars
Workflow task orchestration and real-time status tracking via AWS EventBridge
Electronic Lab Notebook (ELN) entry creation and documentation automation

Use Cases

Bulk importing and registering DNA sequences from FASTA files into the Benchling registry
Automating physical sample transfers and inventory audits within complex laboratory setups
Building event-driven integrations to synchronize Benchling data with external databases or BI tools