GitHub Issue Analysis

About

Streamline the review process for disease ontology requests by assessing GitHub issues for medical and terminological accuracy. This skill helps identify relevant design patterns, searches for more specific parent terms using specialized tools, and generates comprehensive reports that include visual Mermaid diagrams. It ensures all proposed changes are backed by clinical justification and follow strict ontological guidelines, providing a standardized way to validate and document updates to the Mondo Disease Ontology while automating GitHub CLI workflows.

Key Features

• Assess medical and terminological validity of GitHub issue requests
• Identify and propose ontology design patterns for disease classifications
• Search for optimal parents and terms using domain-specific tools like obo-grepl.obo
• Generate structured Markdown reports with automated Mermaid relationship diagrams
• 287 GitHub stars
• Automate GitHub CLI workflows for issue viewing and permission-based commenting

Use Cases

• Validating community-submitted disease classification requests in the Mondo repository
• Generating standardized visual and clinical justifications for hierarchy changes
• Proposing improvements or new design patterns for complex ontological structures