How does this skill assist with notebook backups?

It provides automated scripts to download complete notebook data, including optional attachments, which can be stored in 7z or JSON formats for archival purposes.

What are the requirements to use the LabArchives Integration skill?

You must have an Enterprise LabArchives license with API access enabled, as well as an API access key ID and password provided by your institutional administrator.

Can I integrate my Jupyter notebooks with LabArchives using Claude?

Yes, the skill provides specific workflows to export Jupyter notebooks and upload them directly as entries in your LabArchives notebook with execution metadata.

Can I upload large datasets or specific scientific file formats?

Yes, the skill supports uploading various file types including documents (PDF, DOCX), images, data files (CSV, HDF5), and scientific formats like CIF, MOL, and PDB.

Does this skill support LabArchives servers outside the United States?

Yes, the skill supports regional API endpoints for the US/International, Australia, and UK instances of LabArchives.

LabArchives Integration

Name: LabArchives Integration
Author: Yezez9

byYezez9

0•

Data Science & ML

Automates research documentation and data management by integrating the LabArchives electronic lab notebook platform via its REST API.

The LabArchives Integration skill enables researchers and developers to programmatically manage Electronic Lab Notebooks (ELNs) through Claude. It provides a robust interface for automating repetitive documentation tasks, such as backing up notebook data, uploading experimental attachments, and managing entry metadata. By facilitating regional API support and bridging connections with tools like Jupyter, REDCap, and Protocols.io, this skill ensures that scientific data management remains efficient, compliant, and well-integrated into the modern research software stack.

Key Features

01Generation of institutional site reports and usage analytics

02Third-party integration workflows for Jupyter and REDCap

03Programmatic notebook backup with attachment support

04Automated creation of notebook entries and data uploads

050 GitHub stars

06Regional API endpoint configuration (US, UK, and AU)

Use Cases

01Generating automated activity reports for lab managers to track research progress across multiple notebooks

02Automating the synchronization of daily experimental results from lab instruments to LabArchives entries

03Scheduling programmatic backups of entire research notebooks for long-term institutional compliance

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add yezez9/research-agent labarchive-integration

For use in Claude.ai and ChatGPT

Key Features

01Generation of institutional site reports and usage analytics

02Third-party integration workflows for Jupyter and REDCap

03Programmatic notebook backup with attachment support

04Automated creation of notebook entries and data uploads

050 GitHub stars

06Regional API endpoint configuration (US, UK, and AU)

Use Cases

01Generating automated activity reports for lab managers to track research progress across multiple notebooks

02Automating the synchronization of daily experimental results from lab instruments to LabArchives entries

03Scheduling programmatic backups of entire research notebooks for long-term institutional compliance

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add yezez9/research-agent labarchive-integration

For use in Claude.ai and ChatGPT