NexusMind is a next-generation AI reasoning framework designed to transform scientific research by leveraging graph structures. It employs a sophisticated 8-stage pipeline, utilizing a Neo4j graph database to process complex scientific queries. Through its Advanced Scientific Reasoning Graph-of-Thoughts (ASR-GoT) framework and integration with AI applications like Claude Desktop via the Model Context Protocol (MCP), NexusMind enables dynamic confidence scoring, modular design, and high performance, facilitating deeper insights and accelerated discovery.