Does this skill support bulk data operations?

Yes, the skill provides implementation patterns for batch operations, memory-efficient pagination using generators, and handling asynchronous tasks for high-volume data processing.

Is it possible to trigger actions based on Benchling events?

Yes, the skill outlines integration patterns for subscribing to Benchling events via AWS EventBridge, allowing you to trigger external workflows when entities are created or updated.

How do I authenticate with Benchling using this skill?

You can use API Key Authentication for standalone scripts or OAuth Client Credentials for applications. Always store your credentials securely using environment variables or a secret manager.

Can I manage physical lab samples with this skill?

Absolutely. The skill includes specific capabilities for managing containers, boxes, and locations, including transferring items and managing complex storage hierarchies.

Benchling R&D Integration

Name: Benchling R&D Integration
Author: Microck

byMicrock

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数据科学与机器学习

Automates life sciences research workflows by integrating Benchling's registry, inventory, and notebook systems via Python SDK and REST API.

关于

This skill empowers Claude to interact seamlessly with the Benchling cloud platform, the industry standard for life sciences R&D. It provides comprehensive guidance for managing biological entities such as DNA and protein sequences, automating laboratory inventory operations, and programmatically interacting with electronic lab notebooks (ELN). Whether building event-driven integrations with AWS EventBridge or querying the Benchling Data Warehouse for analytics, this skill ensures best practices for authentication, pagination, and error handling are followed, making it an essential tool for bioinformaticians and lab automation engineers.

主要功能

Benchling Data Warehouse querying and analytics integration
Workflow automation and task status management
Electronic Lab Notebook (ELN) entry creation and linking
Automated inventory tracking for containers, plates, and locations
Registry management for DNA, RNA, and protein sequences
81 GitHub stars

使用场景

Syncing experimental data between Benchling and external analytics platforms
Bulk importing biological sequences from FASTA files into the Benchling Registry
Automating laboratory inventory audits and sample transfers

关于

主要功能

Benchling Data Warehouse querying and analytics integration
Workflow automation and task status management
Electronic Lab Notebook (ELN) entry creation and linking
Automated inventory tracking for containers, plates, and locations
Registry management for DNA, RNA, and protein sequences
81 GitHub stars

使用场景

Syncing experimental data between Benchling and external analytics platforms
Bulk importing biological sequences from FASTA files into the Benchling Registry
Automating laboratory inventory audits and sample transfers