Browse All Agent Skills

Research Multi-Agent Orchestrator

Orchestrates parallel scientist agents to perform deep, multi-stage research and synthesis within codebases and documentation.

Intelligent Mode Cancellation

Terminates active Oh My Claude (OMC) execution modes while managing state cleanup and progress preservation.

Ecomode: Token-Efficient Orchestration

Optimizes token usage and operational costs by routing tasks to the most efficient AI models and parallelizing agent execution.

Security Audit & Code Review

Conducts comprehensive security audits of codebases to identify OWASP vulnerabilities, hardcoded secrets, and unsafe implementation patterns.

Test-Driven Development (TDD)

Enforces a strict Red-Green-Refactor workflow by requiring failing tests before any production code implementation.

Scientific Brainstorming

Facilitates collaborative research ideation and hypothesis generation for scientists and academic researchers.

Scientific Slides

Generates visually engaging, research-backed slide decks and presentations for academic conferences, seminars, and thesis defenses.

Scientific Peer Review Toolkit

Conducts systematic, high-rigor peer reviews of scientific manuscripts and grant proposals across all major research disciplines.

Scholar Evaluation & Research Assessment

Evaluates research papers and scholarly work using the ScholarEval framework to provide structured quality assessments and actionable feedback.

Scikit-Learn ML Framework

Implements professional machine learning workflows in Python including classification, regression, clustering, and data preprocessing.

LabArchives Integration

Automates electronic lab notebook management through the LabArchives REST API for research documentation, data backups, and tool integration.

Pysam Genomic Toolkit

Reads, manipulates, and writes genomic datasets including BAM, VCF, and FASTA files using a Pythonic interface to htslib.

Scientific Critical Thinking

Evaluates the rigor of scientific research by analyzing methodology, statistical validity, and potential biases using standardized frameworks like GRADE and Cochrane.

Statsmodels Statistical Modeling

Performs rigorous statistical modeling, econometric analysis, and time series forecasting using the Statsmodels library.

BRENDA Enzyme Database

Accesses the comprehensive BRENDA enzyme database to retrieve kinetic parameters, biochemical reactions, and metabolic pathway data.

European Nucleotide Archive (ENA) Database Access

Accesses the European Nucleotide Archive (ENA) to retrieve DNA/RNA sequences, raw reads, and genome assemblies for bioinformatics pipelines.

Seaborn Statistical Visualization

Generates publication-quality statistical graphics and complex data visualizations using a high-level, dataset-oriented Python interface.

AlphaFold Database Tools

Accesses and analyzes over 200 million AI-predicted protein structures for bioinformatics and structural biology research.

RDKit Cheminformatics Toolkit

Facilitates advanced molecular analysis and cheminformatics workflows including property calculation, substructure searching, and 3D coordinate generation.

COSMIC Cancer Genomics

Accesses and queries the Catalogue of Somatic Mutations in Cancer (COSMIC) to retrieve high-quality genomic data for precision oncology and cancer research.

ChEMBL Database & Drug Discovery

Queries the ChEMBL database to retrieve bioactive molecule data, drug targets, and bioactivity measurements for medicinal chemistry.

Metabolomics Workbench Database

Accesses the NIH Metabolomics Workbench API to retrieve metabolite structures, study metadata, and standardized chemical nomenclature for biomarker discovery.

PyTDC Therapeutics AI

Facilitates drug discovery and therapeutic machine learning with curated datasets, ADMET benchmarks, and molecular optimization oracles.

Benchling Integration

Automates R&D data management by integrating Claude with the Benchling platform for biological entity tracking, inventory control, and lab notebook documentation.

PubChem Database Explorer

Queries the PubChem database to retrieve chemical properties, perform structure searches, and access bioactivity data for over 110 million compounds.

DNAnexus Integration

Streamlines genomics pipeline development and data management on the DNAnexus cloud platform using the dxpy Python SDK.

Opentrons Lab Automation

Automates laboratory liquid handling workflows by writing Python-based Protocol API v2 scripts for Opentrons Flex and OT-2 robots.

DOCX Professional Document Toolkit

Manipulates, creates, and analyzes Microsoft Word documents with professional-grade tracked changes and scientific schematic integration.

USPTO IP Intelligence

Accesses USPTO APIs to perform comprehensive patent and trademark searches, analyze prosecution history, and track intellectual property assignments.

Scientific Visualization

Generates publication-quality scientific figures and multi-panel layouts using Python libraries while adhering to journal-specific standards.