Data Science & ML Agent Skills

ClinicalTrials.gov Database Navigator

Queries the ClinicalTrials.gov API v2 to search, filter, and extract global clinical study data for medical research and patient matching.

Moon Dev AI Trading Agents

Orchestrates over 48 specialized AI agents for autonomous cryptocurrency trading, market analysis, and backtesting across multiple exchanges.

ClinicalTrials.gov Database Connector

Queries the ClinicalTrials.gov API v2 to search, retrieve, and analyze clinical trial data for research and patient matching.

OpenAlex Academic Database

Queries and analyzes over 240 million scholarly works, authors, and institutions via the OpenAlex API.

Scanpy Single-Cell Analysis

Performs comprehensive single-cell RNA-seq analysis including quality control, clustering, and cell type annotation using the Scanpy framework.

DrugBank Database Analysis

Provides programmatic access and comprehensive analysis of the DrugBank database for pharmaceutical research and bioinformatics workflows.

Aeon Time Series Machine Learning

Provides specialized algorithms and workflows for advanced time series tasks including forecasting, classification, and anomaly detection.

bioRxiv Database Search

Searches and retrieves life sciences preprints from the bioRxiv database with advanced filtering by keywords, authors, and categories.

Histolab Digital Pathology Toolkit

Processes digital pathology whole slide images by automating tissue detection, tile extraction, and preprocessing for machine learning pipelines.

ArXiv Research Search

Searches the arXiv preprint repository for scholarly articles in computer science, physics, mathematics, and quantitative biology.

Bioinformatics Toolkit (gget)

Retrieves genomic, transcriptomic, and proteomic data from 20+ bioinformatics databases using a unified interface.

ClinicalTrials.gov Database

Queries the ClinicalTrials.gov API to search for medical studies, retrieve trial details, and export structured clinical research data.

Astropy Mastery

Streamlines astronomical data analysis and astrophysical calculations using the core Astropy Python library.

Bioinformatics & Genomics Toolkit (gget)

Provides unified access to 20+ genomic databases for sequence analysis, protein structure prediction, and rapid bioinformatics queries.

DrugBank Database Integration

Accesses and analyzes comprehensive pharmaceutical data from DrugBank, including drug properties, interactions, targets, and chemical structures.

Data Visualization Plots

Generates publication-quality scientific visualizations and data plots locally using Python's Matplotlib and Seaborn libraries.

BioRxiv Database Search

Facilitates efficient searching and retrieval of life sciences preprints from the bioRxiv database using keywords, authors, and DOI metadata.

Cirq Quantum Computing

Designs, simulates, and executes quantum circuits on simulators and real quantum hardware using Google's Cirq framework.

Denario Research Automator

Automates end-to-end scientific research workflows from initial data analysis and hypothesis generation to the production of publication-ready LaTeX manuscripts.

RAG Implementation Pro

Builds high-performance Retrieval-Augmented Generation systems using vector databases, semantic search, and advanced retrieval patterns.

Ensembl Genome Database

Queries the Ensembl REST API to retrieve gene annotations, sequences, variants, and comparative genomics data for over 250 species.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines for data preparation, model training, validation, and production deployment.

Flow Nexus Neural Networks

Trains and deploys sophisticated neural network architectures across distributed E2B sandbox environments.

DrugBank Database Analysis

Accesses and analyzes comprehensive pharmaceutical data from DrugBank including drug properties, interactions, and molecular structures.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines from data preparation through model training, validation, and production deployment.

Denario Scientific Research Automation

Automates the end-to-end scientific research lifecycle from data analysis and hypothesis generation to publication-ready LaTeX manuscripts.

ZINC Database Search & Discovery

Accesses the ZINC22 database to search, filter, and retrieve 230M+ purchasable chemical compounds for virtual screening and drug discovery.

LLM Performance Evaluation

Implements comprehensive evaluation strategies for LLM applications using automated metrics, human feedback, and benchmarking.

Reactome Database Integration

Integrates Reactome's open-source curated pathway database for biological pathway analysis, gene mapping, and systems biology research.

Scientific Hypothesis Generation

Generates rigorous, testable scientific hypotheses and detailed experimental designs based on observations and existing literature.