Data Science & ML Agent Skills

deepTools NGS Analysis

2,188

Streamlines high-throughput sequencing data analysis by providing tools for BAM processing, quality control, and publication-quality genomic visualizations.

Biopython Molecular Biology

2,188

Performs complex biological computation, sequence analysis, and bioinformatics workflows using the Biopython library.

Gtars Genomic Analysis

2,188

Processes and analyzes high-performance genomic interval data for computational biology and machine learning applications.

QuTiP Quantum Simulations

2,188

Simulates and analyzes quantum mechanical systems using the QuTiP toolbox for both closed and open system dynamics.

FDA Regulatory Database Access

2,188

Access and analyze comprehensive FDA regulatory data, including drug safety, medical device clearances, and food recalls through the openFDA API.

BioServices Bioinformatics Tool

2,188

Streamlines access to over 40 bioinformatics web services and databases for biological data retrieval and cross-database analysis.

Dask Parallel Computing

2,188

Enables parallel and distributed computing in Python to scale data processing beyond memory limits.

Qiskit Quantum Computing

2,188

Builds, optimizes, and executes quantum circuits and algorithms on simulators or real hardware using the Qiskit framework.

Seaborn Statistical Visualization

2,188

Generates publication-quality statistical graphics and complex data visualizations using the Seaborn Python library.

NetworkX Analysis

2,188

Builds, analyzes, and visualizes complex networks and graph data structures using the comprehensive NetworkX library for Python.

Modal Serverless Python

2,188

Runs Python code in the cloud with serverless containers, autoscaling GPUs, and minimal infrastructure management.

GeoPandas Spatial Analysis

2,188

Empowers Claude with expert capabilities for manipulating, analyzing, and visualizing geospatial vector data using Python.

PyTDC Drug Discovery

2,188

Accesses AI-ready Therapeutics Data Commons (TDC) datasets and benchmarks for drug discovery and pharmaceutical machine learning.

Bioinformatics & Genomic Data (gget)

2,188

Provides unified, rapid access to over 20 genomic databases and bioinformatics analysis tools for DNA and protein research.

Flow Cytometry Data Processor

2,188

Parses and manipulates Flow Cytometry Standard (FCS) files, converting biological data into NumPy arrays and CSV formats for scientific analysis.

Pymoo Optimization

2,188

Solves complex single and multi-objective optimization problems using evolutionary algorithms and Pareto front analysis.

Polars Data Analysis

2,188

Optimizes data processing workflows with high-performance Polars expressions, lazy evaluation, and efficient DataFrame manipulations.

PyOpenMS Mass Spectrometry

2,188

Facilitates advanced mass spectrometry data analysis using the Python interface to the OpenMS library for proteomics and metabolomics.

Medicinal Chemistry Toolkit

2,188

Applies medicinal chemistry rules and structural filters to prioritize drug-like compounds in molecular discovery workflows.

Pysam Genomic Toolkit

2,188

Manipulates genomic datasets including SAM, BAM, VCF, and FASTA files through a Pythonic interface to htslib.

Zarr Python Scientific Data

2,188

Manages large-scale N-dimensional arrays with chunked storage, compression, and cloud-native parallel I/O.

Scikit-Learn Machine Learning

2,188

Implements comprehensive machine learning workflows using scikit-learn for classification, regression, clustering, and data preprocessing.

HMDB Scientific Database Access

2,188

Accesses the Human Metabolome Database (HMDB) to retrieve comprehensive data on small molecule metabolites, clinical biomarkers, and biochemical pathways.

KEGG Database Connector

2,188

Facilitates direct REST API access to the KEGG database for biological pathway analysis, gene mapping, and molecular interaction research.

Scientific Brainstorming

2,188

Facilitates collaborative research ideation to generate hypotheses, challenge assumptions, and explore interdisciplinary connections for creative scientific problem-solving.

NCBI GEO Data Access

2,188

Accesses and manages NCBI Gene Expression Omnibus (GEO) data for transcriptomics and functional genomics research.

ENA Database Integration

2,188

Access and retrieve comprehensive nucleotide sequence data and metadata from the European Nucleotide Archive (ENA) for bioinformatics pipelines.

GWAS Catalog Explorer

2,188

Queries the NHGRI-EBI GWAS Catalog to retrieve genetic variant associations, study metadata, and genomic summary statistics.

ZINC Database Search

2,188

Accesses over 230 million purchasable chemical compounds for virtual screening, drug discovery, and molecular docking studies.

ClinVar Genomic Analysis

2,188

Queries the NCBI ClinVar database to interpret genetic variant pathogenicity and annotate genomic data for research and medicine.