Data Science & ML Agent Skills

Metabolomics Workbench Database

Accesses NIH Metabolomics Workbench to query over 4,200 studies, metabolite structures, and standardized biochemical nomenclature.

DNAnexus Genomics Integration

Streamlines the development, deployment, and management of bioinformatics pipelines and data on the DNAnexus cloud genomics platform.

AlphaFold Protein Structure Database

Access and analyze over 200 million AI-predicted protein structures for structural biology and computational drug discovery.

Advanced PDF Processing

Manipulates, extracts, and generates PDF documents using specialized Python libraries and command-line tools for automated document workflows.

Scholar Evaluation

Evaluates scholarly research papers and proposals using the peer-reviewed ScholarEval framework to ensure scientific rigor and publication readiness.

MarkItDown File Converter

Converts diverse file formats including PDF, Word, and Excel into token-efficient Markdown for seamless LLM processing.

PubChem Chemical Database

Interfaces with the world's largest chemical database to search, retrieve, and analyze molecular data and bioactivity.

ZINC Scientific Database

Accesses over 230 million purchasable compounds for virtual screening, drug discovery, and cheminformatics research.

HMDB Scientific Database

Provides comprehensive access to the Human Metabolome Database for metabolite identification, chemical analysis, and biomarker discovery.

PyTorch Geometric (PyG)

Develops and trains Graph Neural Networks (GNNs) for analyzing irregular data structures and relational datasets.

GWAS Database (NHGRI-EBI)

Queries the NHGRI-EBI GWAS Catalog to retrieve genetic variant associations, study metadata, and polygenic risk score data.

Open Targets Database

Queries the Open Targets Platform to identify and prioritize therapeutic drug targets using genetic, omic, and clinical evidence.

Scientific Critical Thinking

Evaluates scientific research rigor, methodology, and statistical validity using evidence-based frameworks like GRADE and Cochrane.

Ensembl Genomic Database Integration

Accesses and queries the Ensembl REST API for genomic research, gene annotation, and variant analysis across 250+ species.

Scientific Hypothesis Generation

Generates testable scientific hypotheses and detailed experimental designs based on observations and literature evidence.

Scientific Tool Universe

Accesses and orchestrates over 600 scientific tools and databases for bioinformatics, drug discovery, and life sciences research workflows.

AI Agent Council

Aggregates and synthesizes perspectives from multiple AI agents to provide comprehensive, consensus-driven answers to complex queries.

Agent Council

Aggregates and synthesizes diverse perspectives from multiple AI agents to provide a consensus-driven answer to complex queries.

Senior Computer Vision

Implements production-grade computer vision systems including object detection, segmentation, and real-time video processing using industry-standard frameworks like PyTorch and OpenCV.

Senior ML Engineer

Productionizes machine learning models and builds scalable MLOps systems using industry-leading frameworks and best practices.

Senior Prompt Engineer

Optimizes LLM performance and designs production-grade agentic systems using advanced prompt engineering patterns and evaluation frameworks.

Senior Data Scientist

Provides expert guidance on statistical modeling, causal inference, and production-grade machine learning systems to drive data-driven decision-making.

Ark Agentic Framework Analysis

Analyzes the McKinsey Ark repository to help developers understand, implement, and extend provider-agnostic agentic resource patterns.

Tool Creator

Automates the generation of standardized Agent-as-a-Tool and function-based tools for the Strands SDK agent system.

System Prompt Writer

Optimizes and structures system prompts for AI agents using Anthropic's context engineering principles and mandatory Python template escaping rules.

MiniMax AI Voice & TTS

Integrates MiniMax's powerful text-to-speech engine to generate, clone, and design realistic voices directly within your development environment.

Spreadsheet Automation & Analysis

Automates the creation, editing, and analysis of complex spreadsheets including formulas, formatting, and professional layouts.

OpenAI Jupyter Notebook Manager

Automates the creation and management of clean, reproducible Jupyter notebooks for data experiments and educational tutorials.

Academic Paper Search

Searches and retrieves academic literature across multiple scientific databases including arXiv, PubMed, and IEEE Xplore.

Scholar Evaluation

Evaluates research papers, proposals, and literature reviews using the ScholarEval framework for rigorous academic assessment.