Data Science & ML Agent Skills

Koopman Dynamics Generator

Linearizes non-linear dynamical systems using Koopman operator theory to generate predictive models from observables.

Vector Field Analysis

Models and analyzes dynamical systems by assigning vectors to points in phase space to define system evolution.

Plurigrid ASI Orchestrator

Orchestrates complex AI skill ecosystems using category theory, topological synthesis, and deterministic GF(3) conservation.

GMRA Multi-Resolution Analysis

Performs high-dimensional geometric multi-resolution analysis with deterministic local reconstructability across MATLAB, Julia, and Python.

Mutual Awareness Graph Modeler

Maps and analyzes bidirectional observation relationships between agents using sheaf-theoretic consistency and multi-agent awareness graphs.

Tripartite Decompositions

Decomposes complex computational problems into three GF(3)-balanced components for optimized parallel execution and sheaf-theoretic gluing.

HVM Parallel Runtime

Implements massively parallel functional computation using interaction nets and GPU-accelerated graph reduction.

Gay MCP Topological Genesis

Generates and evolves topological code patterns through autopoietic interaction and color-based seeds.

993bdc TiDAR Integrator

Facilitates topological data integration and autopoietic skill evolution within the worldmat framework.

Py-ACSets Graph Rewriting

Performs complex algebraic graph rewriting over Attributed C-Sets (ACSets) using DPO, SPO, and SqPO methodologies.

Topological Logic & GF(3) Verification

Verifies mathematical conservation laws and manages autopoietic logic within topological computational frameworks.

Operad Composition Skill

Enables structured generation and algebraic composition of n-ary operations using colored operads.

Geodesic Manifold

Computes shortest paths on spherical surfaces and Riemannian manifolds for navigation, aviation routing, and spatial analysis.

Supersparsity Unison

Bridges neural network sparsity research with Unison’s content-addressed ability system to optimize sparse computation and scaling.

Topological Aggregation 98e0c4

Facilitates self-evolving topological aggregations and pattern recognition within the Gay MCP framework.

DCC346 Topological Diffusion

Facilitates topological diffusion and autopoietic learning patterns within the Model Context Protocol framework.

Mass Spectrometry Analysis (Matchms)

Processes mass spectrometry data, standardizes metadata, and calculates spectral similarities for metabolomics workflows.

ReasoningBank Agent Learning

Implements adaptive learning and high-performance trajectory tracking for autonomous agents using the AgentDB vector backend.

Reactome Pathway Analysis

Integrates the Reactome pathway database to perform biological enrichment analysis, gene mapping, and molecular interaction queries for systems biology research.

COSMIC Cancer Genomics

Integrates the COSMIC cancer mutation database into bioinformatics workflows for somatic mutation analysis and precision oncology research.

OlmoEarth MLX Spatio-Temporal Intelligence

Analyzes planetary intelligence and crypto-geographic data using AI2 OlmoEarth foundation models optimized for Apple Silicon.

GEO Database Access & Analysis

Accesses and analyzes NCBI Gene Expression Omnibus (GEO) data for transcriptomics and functional genomics research.

Scientific Brainstorming Partner

Facilitates creative scientific ideation by generating hypotheses, exploring interdisciplinary connections, and challenging research assumptions.

Scientific Visualization & Plotting

Creates journal-ready, publication-quality scientific figures with standardized styling, multi-panel layouts, and colorblind-safe palettes.

Denario Autonomous Research

Automates the end-to-end scientific research pipeline from initial hypothesis generation to publication-ready LaTeX manuscripts.

Gestalt Hacking & Pattern Logic

Analyzes and manipulates data patterns using Gestalt perceptual principles and topological logic to identify emergent structures.

Stable Baselines3 RL Framework

Implements and optimizes reinforcement learning agents using the Stable Baselines3 library for PyTorch.

Command-Line Data Science

Provides a comprehensive suite of Unix command-line utilities for high-performance data transformation, validation, and lifecycle tracking.

Reinforcement Learning Gyms

Standardizes and catalogs diverse Gymnasium and OpenAI Gym environments for reinforcement learning across physics, robotics, chemistry, and gaming domains.

Triadic Video Analysis & GF(3) Management

Analyzes and categorizes video content using a GF(3) triadic framework to ensure deterministic processing and system-wide data conservation.