Data Science & ML Agent Skills

Dask Parallel Computing

Enables parallel and distributed computing in Python to scale pandas, NumPy, and custom workflows for massive datasets.

Scientific Critical Thinking

Evaluates research rigor by assessing methodology, statistical validity, and bias using established frameworks like GRADE and Cochrane.

Ensembl Genome Database Access

Accesses the Ensembl REST API to retrieve genomic sequences, gene annotations, and variant analysis data for over 250 species.

Gemini Video Intelligence

Analyzes and extracts deep insights from video files and YouTube URLs using the Google Gemini API.

LLM Evaluation Framework

Implements rigorous evaluation strategies for AI applications using automated metrics, human feedback, and LLM-as-judge patterns.

ML Pipeline Workflow

Orchestrates end-to-end MLOps pipelines from data preparation and model training to production deployment and monitoring.

LLM Performance Evaluation

Implement comprehensive evaluation frameworks for Large Language Model applications using automated metrics, human feedback, and LLM-as-judge patterns.

Video Processor & Transcriber

Automates video format conversion, audio extraction, and high-accuracy speech-to-text transcription using FFmpeg and Whisper.

RAG Systems Implementation

Architects and implements robust Retrieval-Augmented Generation (RAG) systems using vector databases and semantic search to ground AI responses.

Flow Nexus Neural

Deploys and trains neural networks in distributed E2B sandbox environments for advanced machine learning workflows.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines covering data preparation, model training, validation, and production deployment.

RAG Implementation Guide

Build robust Retrieval-Augmented Generation (RAG) systems using vector databases and semantic search to ground AI responses in external data.

Biomni Biomedical Research Agent

Executes autonomous biomedical research tasks across genomics, drug discovery, and molecular biology using integrated databases and code execution.

DrugBank Database Analyst

Accesses and analyzes comprehensive pharmaceutical data from DrugBank for drug discovery, interaction analysis, and pharmacological research.

ML Pipeline & MLOps Workflow

Orchestrates end-to-end MLOps pipelines from data preparation and model training to production deployment and monitoring.

Biomni Biomedical AI Agent

Automates complex biomedical research tasks including genomics analysis, drug discovery, and CRISPR screening using integrated data and code execution.

DNAnexus Genomics Platform Integration

Integrates Claude with the DNAnexus cloud genomics platform to develop bioinformatics apps, manage sequencing data, and orchestrate analysis workflows.

Denario Scientific Research Agent

Automates the end-to-end scientific research lifecycle from data analysis and hypothesis generation to publication-ready LaTeX manuscripts.

Denario Scientific Research Assistant

Automates end-to-end scientific research workflows from initial data analysis to publication-ready LaTeX manuscripts.

AgentDB Vector Search

Implements ultra-fast semantic vector search and HNSW indexing for high-performance RAG systems and intelligent document retrieval.

Scanpy Single-Cell Analysis

Analyzes single-cell RNA-seq data using Python for quality control, clustering, and cell type annotation.

Financial Modeling Suite

Builds professional-grade financial models including DCF analysis, Monte Carlo simulations, and multi-scenario investment projections.

FlowIO FCS File Handler

Parses and manages Flow Cytometry Standard (FCS) files to extract event data as NumPy arrays and handle complex metadata.

Model Registry Maintainer

Maintains and updates LLM model registries, pricing structures, and context window limits across backend configuration files.

OpenAlex Academic Database

Query and analyze over 240 million scholarly works using the OpenAlex open academic database.

Moon Dev Trading Agents

Orchestrates over 48 specialized AI agents for autonomous cryptocurrency trading and market analysis across multiple decentralized exchanges.

Cosmic Cancer Database Integration

Streamlines access to the COSMIC database for retrieving somatic mutations, cancer gene census lists, and mutational signatures for oncology research.

Moon Dev AI Trading Agents

Orchestrates a fleet of over 48 specialized AI agents for autonomous cryptocurrency trading, market analysis, and risk management across multiple exchanges.

Cosmic Cancer Mutation Database

Accesses and integrates the world's largest somatic mutation database for cancer genomics and precision oncology research.

Pymatgen Materials Genomics

Streamlines materials science research by providing advanced tools for crystal structure manipulation, phase diagram construction, and electronic structure analysis.