Data Science & ML Agent Skills

Flow Nexus Neural Networks

Trains and deploys complex neural network architectures within distributed E2B sandbox environments using Flow Nexus.

OpenAlex Academic Literature

Queries and analyzes the OpenAlex database to search scholarly literature, track citations, and perform bibliometric analysis.

Advanced Excel & Spreadsheet Engineering

Creates, modifies, and analyzes professional Excel spreadsheets with automated formula recalculation and industry-standard financial formatting.

ESM Protein Design & Analysis

Empowers protein engineering and biological research through state-of-the-art ESM3 generative models and ESM C embeddings.

SHAP Model Interpretability

Explains machine learning model predictions and feature importance using mathematically grounded Shapley values and high-impact visualizations.

Slurm GPU Cluster Management

Manages GPU-accelerated workloads on Slurm clusters using Apptainer containers for training and inference.

Scikit-Survival Analyst

Performs comprehensive survival analysis and time-to-event modeling using the scikit-survival library in Python.

ZINC Database

Searches and retrieves information from the ZINC database of 230M+ purchasable compounds for drug discovery and virtual screening.

KEGG Database Analysis

Integrates KEGG REST API access into workflows for biological pathway analysis, gene mapping, and molecular interaction research.

ClinVar Database Integration

Queries NCBI ClinVar to retrieve and interpret clinical significance data for human genetic variants.

Cook County Data Portal

Enables seamless querying and extraction of datasets from the Cook County Open Data Portal using SODA and SoQL.

Chicago Data Portal Explorer

Facilitates seamless querying and downloading of City of Chicago municipal datasets using the Socrata Open Data API and SoQL.

US Census Data Query

Streamlines the retrieval of demographic, economic, and housing data from the US Census Bureau API.

ClinPGx Pharmacogenomics Database

Accesses comprehensive pharmacogenomics data for precision medicine, genotype-guided dosing, and clinical decision support.

ChEMBL Database Explorer

Accesses and queries the ChEMBL database for bioactive molecules, drug targets, and bioactivity data within medicinal chemistry workflows.

AI Multimodal Processing

Integrates Google Gemini's multimodal capabilities to process audio, video, images, and documents directly within your development workflow.

Cosmic Cancer Database Access

Access and query the COSMIC database for somatic mutations, cancer gene census, and mutational signatures to support precision oncology research.

Pydantic AI Agent Builder

Builds production-grade AI agents using the Pydantic AI framework with robust type safety and structured outputs.

Excel & Spreadsheet Mastery

Automates professional-grade spreadsheet creation, financial modeling, and data analysis with formula preservation and validation.

Google ADK Python

Builds, evaluates, and deploys code-first AI agents and multi-agent systems using Google's Agent Development Kit.

CSV Data Summarizer

Analyzes CSV files to provide immediate statistical summaries and automated data visualizations using Python and pandas.

Excel & Financial Modeling Pro

Automates spreadsheet creation, complex financial modeling, and data analysis with professional formatting and formula integrity.

PathML Computational Pathology

Analyzes whole-slide pathology images and multiparametric imaging data using advanced machine learning and spatial graph techniques.

Pysam Genomic Toolkit

Manipulates genomic datasets and processes Next-Generation Sequencing (NGS) files using a Pythonic interface to htslib.

LLM Evaluation & Metrics

Implements comprehensive evaluation frameworks for LLM applications using automated metrics, human feedback, and LLM-as-judge patterns.

Phylogenetic Tree Analysis (ETE)

Manipulates, analyzes, and visualizes phylogenetic and hierarchical tree structures with biological database integration.

Matplotlib Visualization

Generates high-quality static, animated, and interactive visualizations for data analysis and scientific publication.

Strategy Translator

Translates trading strategy documentation into production-ready Python backtesting code and TradingView Pine Script.

Neural Network Builder

Automates the design, configuration, and implementation of complex neural network architectures for various machine learning tasks.

Genome Analyzer

Analyzes and processes genomic data sequences to extract biological insights and automate bio-informatics workflows.