Data Science & ML Agent Skills

Histolab Pathology Toolkit

Processes and prepares whole slide pathology images for deep learning and digital pathology workflows.

Scientific Critical Thinking

Evaluates scientific research rigor and methodology through systematic analysis of experimental design, statistical validity, and potential biases.

Prompt Engineering Expert

Provides expert guidance and implementation patterns for crafting highly effective LLM prompts using advanced techniques like chain-of-thought and few-shot learning.

PufferLib RL Framework

Develops high-performance reinforcement learning systems with optimized PPO training, vectorized simulations, and multi-agent support.

Excel & Spreadsheet Expert

Creates, modifies, and analyzes Excel spreadsheets with production-grade formulas, professional formatting, and financial modeling standards.

Hydrological Forecasting Suite

Performs hydrological modeling and streamflow forecasting using Julia-based classical and machine learning models.

AI Prompting Standards

Optimizes AI agent performance through Anthropic-based context engineering and prompt structure standards.

Julia HydroTools

Provides specialized functions for hydrological modeling and climate data processing within the Julia environment.

PyLabRobot Lab Automation

Automates laboratory workflows and controls liquid handling robots, plate readers, and analytical equipment through a unified Python interface.

Custom Agent Architect

Streamlines the design and architecture of domain-specific AI agents using Claude Agent SDK patterns.

PubMed Database Research

Automates biomedical literature searches and data retrieval from the PubMed database using advanced MeSH queries and the E-utilities API.

CSV Data Summarizer

Analyzes CSV files automatically to generate comprehensive statistical summaries and tailored visualizations using Python and pandas.

Statsmodels Statistical Toolkit

Provides a comprehensive suite of statistical modeling tools for rigorous inference, hypothesis testing, and econometric analysis in Python.

NeuroKit2 Biosignal Analysis

Processes and analyzes complex physiological data including ECG, EEG, and EDA for scientific research and health applications.

Transformers AI Model Integration

Integrates Hugging Face Transformers for advanced natural language processing, computer vision, and audio tasks within development workflows.

Pymatgen Materials Science

Facilitates advanced materials analysis, crystal structure manipulation, and computational workflows using the Python Materials Genomics library.

FDA Database Access

Simplifies querying the openFDA API to analyze regulatory data, drug safety profiles, medical device clearances, and food recalls.

Vaex Big Data Analysis

Processes and analyzes massive tabular datasets with billions of rows using out-of-core DataFrame operations and lazy evaluation.

Data, AI & Machine Learning Roadmap

Provides comprehensive guidance and implementation patterns for data science, machine learning engineering, and AI application development.

Metabolomics Workbench Database

Integrates with the NIH Metabolomics Workbench REST API to query metabolite data, standardized nomenclature, and experimental studies for biomarker discovery.

HMDB Database Explorer

Accesses the Human Metabolome Database (HMDB) to retrieve metabolite data, chemical properties, and clinical biomarkers for metabolomics research.

Advanced XLSX Spreadsheet Automation

Automates professional-grade spreadsheet creation, editing, and analysis with a focus on formula integrity and financial modeling standards.

UMAP-Learn Dimensionality Reduction

Performs high-performance nonlinear dimensionality reduction for data visualization, clustering preprocessing, and supervised manifold learning.

ClinicalTrials.gov Database

Accesses the ClinicalTrials.gov API v2 to search, filter, and export global clinical research data for medical analysis.

GWAS Catalog Database

Queries the NHGRI-EBI GWAS Catalog to retrieve SNP-trait associations, genetic variant data, and genome-wide association study summary statistics.

Scientific Brainstorming

Facilitates collaborative research ideation by generating hypotheses, identifying research gaps, and exploring interdisciplinary connections for scientific problem-solving.

RDKit Cheminformatics

Provides comprehensive cheminformatics capabilities for molecular analysis, manipulation, and drug discovery workflows.

Ensembl Genome Database Integration

Accesses the Ensembl REST API to retrieve genomic sequences, gene annotations, and variant data for over 250 species.

Scholar Evaluation Framework

Systematically evaluates research papers, literature reviews, and academic methodologies using the ScholarEval framework to ensure scientific rigor and novelty.

Data & AI Engineering

Builds and deploys robust machine learning models, data pipelines, and intelligent LLM applications using Python and industry-standard frameworks.