Data Science & ML Agent Skills
Discover Agent Skills for data science & ml. Browse 53skills for Claude, ChatGPT & Codex.
NeuroKit2 Biosignal Analysis
Processes and analyzes complex physiological signals including ECG, EEG, and EDA using a comprehensive Python toolkit.
COBRApy Metabolic Modeling
Performs constraint-based reconstruction and analysis of metabolic models using Python for systems biology and metabolic engineering.
ESM Protein Engineering Toolkit
Empowers protein research and design using state-of-the-art ESM3 and ESM C language models for sequence generation, structure prediction, and representation learning.
Plotly Data Visualization
Generates interactive, publication-quality data visualizations and dashboards using the Plotly Python library.
Arboreto Gene Regulatory Network Inference
Infers gene regulatory networks from transcriptomics data using scalable gradient boosting and random forest algorithms.
deepTools NGS Analysis
Analyzes high-throughput sequencing data to perform quality control, normalization, and publication-quality visualization for NGS experiments.
Gtars Genomic Toolkit
Provides high-performance tools for genomic interval analysis, overlap detection, and machine learning preprocessing using Rust and Python.
Pinecone Vector Database
Integrates managed vector databases into AI applications for production-grade RAG, semantic search, and recommendation systems.
FluidSim CFD Framework
Simulates high-performance fluid dynamics using pseudospectral methods and Python-based HPC workflows.
Biomni Biomedical Research Agent
Automates complex biomedical research tasks including genomics, drug discovery, and clinical data analysis using an autonomous AI agent framework.
ENA Bioinformatics Database
Accesses the European Nucleotide Archive (ENA) to retrieve genomic sequences, raw reads, and metadata for bioinformatics pipelines.
DiffDock Molecular Docking
Predicts high-accuracy 3D protein-ligand binding poses using diffusion-based deep learning for structure-based drug design.
NCBI Gene Database Integration
Accesses and queries the NCBI Gene database to retrieve comprehensive genetic information, sequences, and functional annotations via E-utilities and Datasets APIs.
Histolab Digital Pathology Toolkit
Processes digital pathology whole slide images by automating tissue detection, tile extraction, and preprocessing for machine learning pipelines.
Gtars Genomic Toolkit
Accelerates genomic interval analysis and machine learning preprocessing using a high-performance Rust-based toolkit with Python bindings.
AI Multimodal Processing
Processes and generates audio, video, images, and complex documents using Google Gemini's advanced multimodal API capabilities.
Arboreto GRN Inference
Infers gene regulatory networks (GRNs) from transcriptomics data using scalable algorithms like GRNBoost2 and GENIE3.
NCBI GEO Genomics Database
Accesses and analyzes gene expression and functional genomics data from the NCBI Gene Expression Omnibus repository.
PyHealth - Healthcare AI Toolkit
Develops and deploys specialized machine learning models for healthcare using clinical datasets and medical coding systems.
PyTorch ATen Dispatch V2 Converter
Automates the migration of legacy PyTorch AT_DISPATCH macros to the modern AT_DISPATCH_V2 API.
PyOpenMS Analysis
Facilitates mass spectrometry data analysis using the pyOpenMS library for proteomics and metabolomics workflows.
FDA Regulatory Database Access
Provides programmatic access to openFDA datasets for drug safety research, medical device surveillance, and food recall analysis.
HMDB Database Assistant
Accesses the Human Metabolome Database to retrieve metabolite properties, clinical biomarker data, and spectral information for metabolomics research.
FluidSim CFD Framework
Simulates complex fluid dynamics using high-performance Python pseudospectral methods for Navier-Stokes and geophysical flow equations.
NetworkX Graph Analysis
Simplifies the creation, manipulation, and analysis of complex networks and graph data structures in Python.
ToolUniverse Scientific Workflows
Automates complex scientific research workflows and tool discovery across bioinformatics, genomics, and drug discovery domains.
EdgarTools SEC Analysis
Queries and analyzes SEC filings and financial statements for deep financial research and company data extraction.
Gemini AI Integration
Integrates Google's Gemini models into your terminal workflow for advanced code analysis and complex multi-model reasoning.
Plotly Data Visualization
Generates interactive, publication-quality scientific and statistical visualizations using the Plotly Python library.
FluidSim CFD Simulation
Simplifies high-performance computational fluid dynamics (CFD) simulations and analysis using Python and pseudospectral methods.
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