Data Science & ML Claudeスキル

Scanpy Single-Cell Analysis

Performs end-to-end single-cell RNA-seq analysis workflows including quality control, clustering, and cell type annotation using the Scanpy toolkit.

Universal Markdown Document Converter

Converts over 20 diverse file formats into LLM-optimized Markdown for seamless data processing and RAG integration.

Medchem Molecular Filtering

Applies medicinal chemistry rules and structural filters to prioritize compound libraries for drug discovery.

NCBI Gene Database

Queries and retrieves comprehensive genomic data from NCBI Gene databases for biological research and bioinformatics.

LaminDB Biological Data Management

Manages biological datasets with full lineage tracking, ontology-based validation, and FAIR compliance.

Crypto Arbitrage Finder

Identifies and analyzes profitable cryptocurrency arbitrage opportunities across centralized and decentralized exchanges in real-time.

COBRApy Metabolic Modeling

Performs constraint-based metabolic modeling and analysis for systems biology and metabolic engineering using the COBRApy library.

Biomni Biomedical AI

Automates complex biomedical research tasks including genomics analysis, drug discovery, and clinical data interpretation through autonomous AI agents.

Geniml Genomic Interval ML

Streamlines machine learning workflows for genomic interval data using region embeddings, single-cell analysis, and consensus peak building.

AnnData Genomics & Data Science

Manages annotated data matrices and metadata for single-cell genomics and large-scale biological datasets in Python.

Agent Specialization Guide

Guides the architectural design and refactoring of AI agents into focused, single-purpose specialists to maximize performance and accuracy.

ML Researcher (RAN & RL)

Conducts advanced machine learning research for Radio Access Networks using reinforcement learning, causal inference, and cognitive frameworks.

Biopython Bioinformatics Tools

Streamlines computational molecular biology tasks and bioinformatics workflows using the Biopython library.

GeoPandas Geospatial Analysis

Enables advanced geospatial vector data analysis, geometric operations, and spatial mapping within Python environments.

FluidSim CFD Framework

Executes high-performance computational fluid dynamics simulations and analysis using pseudospectral methods in Python.

Neural Network Builder

Automates the design, configuration, and implementation of complex neural network architectures for various machine learning tasks.

AgentDB Memory Patterns

Implements high-performance persistent memory and pattern learning for stateful AI agents using AgentDB.

Mobility Manager

Optimizes 5G RAN mobility and handover performance using cognitive AI and predictive trajectory modeling.

PyTDC Therapeutics Data Commons

Accesses and manages AI-ready drug discovery datasets, benchmarks, and molecular oracles for therapeutic machine learning.

ReasoningBank Intelligence

Implements adaptive learning and meta-cognitive systems to enable AI agents to recognize patterns and optimize strategies through experience.

Quantum Physics Simulation (QuTiP)

Simulates and analyzes quantum mechanical systems using the Quantum Toolbox in Python (QuTiP).

AgentDB Advanced Features

Enables high-performance distributed vector search and multi-agent coordination using QUIC synchronization and hybrid search.

AgentDB Reinforcement Learning Plugins

Empowers AI agents to learn and improve through experience using 9 specialized reinforcement learning algorithms and WASM-accelerated inference.

Scikit-Bio

Analyzes biological data including sequences, phylogenetic trees, and microbial diversity metrics using specialized Python tools.

Astropy Astronomy Toolkit

Provides comprehensive tools for astronomical data analysis, coordinate transformations, and cosmological calculations within Python environments.

Pysam Genomic Toolkit

Manipulates genomic datasets and processes Next-Generation Sequencing (NGS) files using a Pythonic interface to htslib.

UMAP-Learn Dimensionality Reduction

Performs high-performance nonlinear dimensionality reduction for data visualization, clustering preprocessing, and supervised manifold learning.

Prompt Engineering Expert

Provides expert guidance and implementation patterns for crafting highly effective LLM prompts using advanced techniques like chain-of-thought and few-shot learning.

DiffDock Molecular Docking

Predicts high-accuracy 3D protein-ligand binding poses using diffusion-based deep learning for structure-based drug design.

Civitai Video Performance Analyst

Analyzes Civitai video engagement and content metrics through natural language SQL queries and automated reporting.