Data Science & ML Claudeスキル

Seaborn Statistical Visualization

Generates publication-quality statistical graphics and exploratory data visualizations using the Seaborn Python library.

PubChem Database Explorer

Accesses and queries the world's largest chemical database for compound information, molecular properties, and bioactivity data.

Aeon Time Series ML

Simplifies complex time series machine learning tasks including forecasting, classification, and anomaly detection using a scikit-learn compatible toolkit.

BioRxiv Research Database

Searches and retrieves metadata and full-text PDFs from the bioRxiv preprint server for life sciences research discovery.

CELLxGENE Census Genomics

Provides programmatic access to standardized single-cell genomics data for large-scale analysis and machine learning.

FluidSim CFD Framework

Simulates complex fluid dynamics using high-performance Python-based pseudospectral methods for scientific research.

LabArchives Integration

Automates electronic lab notebook workflows by managing entries, attachments, and backups through the LabArchives REST API.

Scout Mindset Bias Check

Detects and mitigates cognitive biases to improve decision-making, forecasting accuracy, and intellectual honesty.

ClinPGx Database

Provides programmatic access to comprehensive pharmacogenomics data for precision medicine, clinical guidelines, and gene-drug interaction analysis.

Model Equivariance Auditor

Verifies that machine learning models correctly respect intended symmetries through systematic numerical tests and debugging guidance.

SimPy Discrete-Event Simulation

Builds and manages process-based discrete-event simulations in Python to model complex systems like manufacturing, logistics, and network traffic.

PyTorch Geometric (PyG)

Develops and trains Graph Neural Networks (GNNs) for complex data structures like social networks, molecules, and 3D point clouds.

Causal Inference & Root Cause Analysis

Systematically investigates causal relationships to identify fundamental root causes and distinguish them from symptoms or correlations.

PubMed Database Access

Facilitates advanced biomedical literature research and programmatic access to the National Library of Medicine's PubMed database via E-utilities.

ChEMBL Bioactivity Database

Accesses ChEMBL's vast repository of bioactive molecules and drug discovery data for medicinal chemistry and pharmacology research.

Gtars Genomic Data Analysis

Analyzes and processes high-performance genomic interval data for computational biology and machine learning workflows.

Transformers Model Integration

Implements and fine-tunes state-of-the-art machine learning models for natural language processing, computer vision, and audio tasks.

ESM Protein Language Models

Powers protein engineering workflows with state-of-the-art generative design, structure prediction, and high-quality sequence embeddings.

ENA Bioinformatics Database

Accesses and retrieves nucleotide sequence data, raw reads, and genome assemblies from the European Nucleotide Archive.

Bioinformatics Query Toolkit (gget)

Provides unified, high-speed access to 20+ genomic databases and protein structure prediction tools directly from the command line.

scvi-tools for Single-Cell Analysis

Analyzes single-cell omics data using deep generative models and probabilistic frameworks for batch correction and multimodal integration.

Scientific Critical Thinking

Evaluates research rigor, methodology, and statistical validity to critically analyze scientific claims and evidence quality.

Zarr Python Array Management

Manages large-scale N-dimensional arrays with efficient chunking, compression, and cloud-native storage integration.

HMDB Database Access

Accesses the Human Metabolome Database (HMDB) to retrieve detailed information on over 220,000 human metabolites, including chemical properties, clinical biomarkers, and spectral data.

Statsmodels Statistical Analysis

Performs rigorous statistical modeling, econometric analysis, and hypothesis testing using Python's premier inference toolkit.

D3.js Data Visualization

Builds custom, interactive data-driven visualizations using D3.js for complex layouts, maps, and bespoke charting requirements.

Astropy Astronomy Toolkit

Provides comprehensive tools for astronomical data analysis, coordinate transformations, and physical unit conversions in Python.

MarkItDown Converter

Converts diverse file formats including PDFs, Office documents, and media into LLM-optimized Markdown for AI processing.

NCBI Gene Database Connector

Queries and retrieves comprehensive genetic data from NCBI using E-utilities and Datasets APIs for biological research and gene annotation.

PyLabRobot Lab Automation

Automates laboratory liquid handling and equipment control through a hardware-agnostic Python interface.