Data Science & ML Claudeスキル

CZ CELLxGENE Census Analysis

Facilitates programmatic access to over 61 million standardized single-cell genomics data points for advanced querying and analysis.

Scanpy Single-Cell Analysis

Analyzes single-cell RNA-seq data with standardized workflows for quality control, clustering, and cell type annotation.

BRENDA Enzyme Database Integration

Accesses the BRENDA database via SOAP API to retrieve kinetic parameters, reaction equations, and organism-specific enzyme data for biochemical research.

Prompt Engineer

Architects high-performance system instructions and prompt patterns to optimize Large Language Model outputs and consistency.

Academic Research Engineer

Implements high-performance systems and complex algorithms with absolute scientific rigor and formal correctness.

Scientific Schematics

Generates publication-quality scientific diagrams and technical schematics with automated AI quality review and smart iteration.

Project Designer

Transforms initial software concepts into comprehensive, well-architected technical designs and implementation roadmaps.

PubChem Chemical Informatics

Queries the PubChem database to retrieve chemical structures, molecular properties, and bioactivity data for cheminformatics workflows.

Voice AI Development Architect

Builds low-latency, production-grade voice applications using real-time APIs, advanced synthesis, and streaming transcription services.

Reference Indexer

Indexes and manages external reference documents to power Retrieval-Augmented Generation (RAG) for domain-specific AI workflows.

DNAnexus Genomics Integration

Streamlines genomics pipeline development and data management on the DNAnexus cloud platform using the dxpy Python SDK.

PyTorch Docstring Writer

Generates and updates professional PyTorch-style docstrings using Sphinx and reStructuredText conventions.

Math Intelligence Router

Orchestrates complex mathematical computations by deterministically routing natural language requests to specialized CLI tools for symbolic math, logic, and geometry.

Adaptyv Protein Lab

Connects Claude to cloud laboratory services for automated protein testing, sequence optimization, and wet-lab validation.

Trading Backtest & Colab Optimizer v4

Corrects multi-action trading logic bugs and optimizes backtesting notebooks for Google Colab environments.

Globus Dataset Staging

Manages large-scale scientific dataset transfers between remote Globus endpoints and high-performance computing clusters.

Snakemake Per-Channel Resume Logic

Implements granular skip-existing checks in Snakemake wrapper scripts to resume interrupted HPC jobs without re-processing completed channels.

Weighted Autofluorescence Subtraction

Enhances multiplex immunofluorescence images by applying range-specific weights to remove background noise while preserving delicate biological signals.

bioRxiv Research Database Search

Searches and retrieves life sciences preprints from the bioRxiv database with advanced filtering and PDF download capabilities.

Therapeutics Data Commons (PyTDC)

Facilitates drug discovery and therapeutic machine learning by providing AI-ready datasets, benchmarks, and molecular evaluation oracles.

KINTSUGI GPU-Only SLURM Scheduling

Optimizes KINTSUGI batch processing by enforcing GPU-only SLURM scheduling to achieve up to 25x speedups over CPU fallback.

Gemini CLI Integration

Integrates the Google Gemini CLI into Claude to provide large-context analysis, safe sandbox execution, and structured code modifications.

PyTorch Geometric (PyG) Support

Enables development and training of Graph Neural Networks (GNNs) using the PyTorch Geometric library.

PubMed Database Access & Search

Enables advanced biomedical literature searches and programmatic data retrieval via the PubMed E-utilities REST API.

Research Question Refiner

Transforms vague research interests into concrete, actionable, and tractable research questions with a systematic feasibility analysis.

GWAS Catalog Database

Queries the NHGRI-EBI GWAS Catalog to retrieve SNP-trait associations, genetic variant data, and genome-wide association study summary statistics.

HMDB Database Explorer

Accesses the Human Metabolome Database (HMDB) to retrieve metabolite data, chemical properties, and clinical biomarkers for metabolomics research.

Genomic Machine Learning (Geniml)

Builds machine learning models and unsupervised embeddings for genomic interval data and BED file collections.

FDA Database Access

Simplifies querying the openFDA API to analyze regulatory data, drug safety profiles, medical device clearances, and food recalls.

Transformers AI Model Integration

Integrates Hugging Face Transformers for advanced natural language processing, computer vision, and audio tasks within development workflows.