Data Science & ML Claude 技能

Hypogenic Scientific Discovery

Automates scientific hypothesis generation and testing by combining observational data with research literature using large language models.

ClinicalTrials.gov Database

Queries the ClinicalTrials.gov API to search for medical studies, retrieve trial details, and export structured clinical research data.

COSMIC Cancer Database

Accesses the Catalogue of Somatic Mutations in Cancer (COSMIC) to retrieve somatic mutations, gene fusions, and mutational signatures for oncology research.

DrugBank Database Integration

Accesses and analyzes comprehensive pharmaceutical data from DrugBank, including drug properties, interactions, targets, and chemical structures.

BioServices Bioinformatics

Provides a unified Python interface for accessing over 40 major bioinformatics web services and databases including UniProt, KEGG, and ChEMBL.

Data Visualization Plots

Generates publication-quality scientific visualizations and data plots locally using Python's Matplotlib and Seaborn libraries.

ENA Bioinformatics Database

Interfaces with the European Nucleotide Archive to programmatically retrieve DNA/RNA sequences, raw reads, and genome metadata.

Denario Research Assistant

Automates end-to-end scientific research workflows from initial data analysis to publication-ready LaTeX manuscripts.

DiffDock Molecular Docking

Predicts 3D protein-ligand binding poses using diffusion-based deep learning for structure-based drug design.

Metabolomics Workbench Database

Accesses the NIH Metabolomics Workbench REST API to query metabolite structures, experimental studies, and mass spectrometry data.

Scientific Brainstorming Partner

Facilitates creative scientific research ideation through collaborative hypothesis generation and interdisciplinary connection mapping.

RAG Implementation Pro

Builds high-performance Retrieval-Augmented Generation systems using vector databases, semantic search, and advanced retrieval patterns.

ClinicalTrials.gov Data Integrator

Queries and analyzes clinical trial data from the official ClinicalTrials.gov API v2 for research and patient matching.

Ensembl Genome Database

Queries the Ensembl REST API to retrieve gene annotations, sequences, variants, and comparative genomics data for over 250 species.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines for data preparation, model training, validation, and production deployment.

Flow Nexus Neural Networks

Trains and deploys sophisticated neural network architectures across distributed E2B sandbox environments.

DrugBank Database Analysis

Accesses and analyzes comprehensive pharmaceutical data from DrugBank including drug properties, interactions, and molecular structures.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines from data preparation through model training, validation, and production deployment.

Denario Scientific Research Automation

Automates the end-to-end scientific research lifecycle from data analysis and hypothesis generation to publication-ready LaTeX manuscripts.

NeuroKit2 Biosignal Processing

Processes and analyzes comprehensive physiological signals including ECG, EEG, and EDA for psychophysiology and clinical research.

Denario Research Automator

Automates end-to-end scientific research workflows from initial data analysis and hypothesis generation to the production of publication-ready LaTeX manuscripts.

LLM Performance Evaluation

Implements comprehensive evaluation strategies for LLM applications using automated metrics, human feedback, and benchmarking.

Reactome Database Integration

Integrates Reactome's open-source curated pathway database for biological pathway analysis, gene mapping, and systems biology research.

Scientific Hypothesis Generation

Generates rigorous, testable scientific hypotheses and detailed experimental designs based on observations and existing literature.

AgentDB Vector Search

Implements ultra-high-performance semantic vector search and document retrieval for Claude-powered RAG systems and intelligent knowledge bases.

PDF Report Generator

Generates professional, multi-page PDF reports with formatted text, tables, and embedded visualizations using the ReportLab library.

Matchms Mass Spectrometry Analysis

Processes and analyzes mass spectrometry data using Python-based spectral similarity metrics and metadata harmonization.

Flow Nexus Neural Networks

Trains and deploys distributed neural networks within secure E2B sandbox environments using the Flow Nexus framework.

deepTools NGS Analysis

Automates Next-Generation Sequencing (NGS) data processing, quality control, and publication-quality visualization.

ESM Protein Design & Modeling

Enables advanced protein engineering, sequence generation, and structure prediction using Evolutionary Scale Modeling.